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IDSCAB78701 TypeCDS
From1457755 nt length597
To1457159 aa length198
Gene pI9.6
Definitionputative regulatory protein M.W (Da)21808
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7138 putative regulatory protein3261.0e-90
coelSCO1200 putative regulatory protein3306.0e-92
sgrSGR_503 putative transcriptional regulator2683.0e-73
saceSACE_6312 transcriptional regulator, XRE family with cupin sensor2838.0e-78
nfarnfa45130 hypothetical protein2621.0e-71

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Cupin_21Cupin domain116-18255.14e-15

HTH_31Helix-turn-helix22-7648.46.6e-13

HTH_311Helix-turn-helix domain19-7646.82.6e-12

HTH_191Helix-turn-helix domain20-7733.53.1e-08

HTH_261Cro/C1-type HTH DNA-binding domain21-7730.63e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_059080242.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 9977.0e-138
WP_046919586.1 XRE family transcriptional regulator [Streptomyces stellisca... 9881.5e-136
WP_005475351.1 XRE family transcriptional regulator [Streptomyces bottropen... 9821.3e-135
WP_086747569.1 XRE family transcriptional regulator [Streptomyces scabiei] 9784.7e-135
WP_086754725.1 XRE family transcriptional regulator [Streptomyces scabiei] 9733.7e-134
WP_060885613.1 MULTISPECIES: XRE family transcriptional regulator [Streptom... 9724.1e-134
WP_093789717.1 XRE family transcriptional regulator [Streptomyces sp. cf124... 9724.3e-134
WP_046705688.1 XRE family transcriptional regulator [Streptomyces europaeis... 9716.6e-134
WP_037704965.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 9691.3e-133
WP_033529060.1 XRE family transcriptional regulator [Streptomyces galbus] 9672.5e-133

PSORT result

LocalizationCertaintyPSORT said
Not Clear