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IDSCAB79551 TypeCDS
From1349434 nt length873
To1348562 aa length290
Genesig pI9.03
Definitionputative RNA polymerase ECF-subfamily sigma factor M.W (Da)31532
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2597 putative RNA polymerase ECF-subfamily sigma factor2095.0e-55
sgrSGR_4307 putative RNA polymerase ECF-subfamily sigma factor2332.0e-62

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 238-10253.11.8e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_063649850.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sc... 12621.0e-174
WP_078852378.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sc... 12577.8e-174
WP_059080175.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sc... 12142.0e-167
WP_067444153.1 sigma-70 family RNA polymerase sigma factor [Streptomyces li... 10753.7e-146
KOX04401.1 RNA polymerase subunit sigma [Streptomyces sp. NRRL B-1140] 10716.0e-146
WP_053668458.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 10708.4e-146
WP_052310226.1 sigma-70 family RNA polymerase sigma factor [Streptomyces vi... 10592.1e-144
EFL30319.1 RNA polymerase ECF-subfamily sigma factor [Streptomyces viridochr... 10596.4e-144
WP_010037421.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ch... 10546.7e-144
ELS58274.1 putative RNA polymerase sigma factor [Streptomyces viridochromoge... 10513.8e-143

PSORT result

LocalizationCertaintyPSORT said
Not Clear