ID	SCAB87111	Type	CDS
From	414796	nt length	852
To	415647	aa length	283
Gene	sig	pI	5.15
Definition	putative RNA polymerase sigma factor	M.W (Da)	31607
Note		AseI frg.	A
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	228-277	63.4	9.4e-18
	Sigma70_r3	1	Sigma-70 region 3	140-208	62.0	3.7e-17
	Sigma70_r2	1	Sigma-70 region 2	60-130	58.0	5.4e-16
	Sigma70_r4_2	1	Sigma-70, region 4	228-275	40.6	1.4e-10
	KORA	1	TrfB plasmid transcriptional repressor	220-273	30.1	4e-07

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_060879790.1	RNA polymerase sigma factor SigF [Streptomyces scabiei]	1303	0.0e+00
WP_059078746.1	RNA polymerase sigma factor SigF [Streptomyces scabiei] >dbj...	1300	0.0e+00
WP_046703514.1	RNA polymerase sigma factor SigF [Streptomyces europaeiscabi...	1257	1.2e-174
WP_046915761.1	RNA polymerase sigma factor SigF [Streptomyces stelliscabiei...	1254	3.3e-174
WP_086748815.1	RNA polymerase sigma factor SigF [Streptomyces scabiei]	1248	2.4e-173
WP_005474021.1	RNA polymerase sigma factor SigF [Streptomyces bottropensis]...	1248	2.9e-173
WP_037692633.1	RNA polymerase sigma factor SigF [Streptomyces scabiei] >gb	1246	5.6e-173
WP_033532396.1	RNA polymerase sigma factor SigF [Streptomyces galbus]	1208	2.7e-167
WP_073493949.1	RNA polymerase sigma factor SigF [Streptomyces phaeoluteigri...	1186	6.2e-164
WP_023590346.1	RNA polymerase sigma factor SigF [Streptomyces thermolilacin...	1130	2.2e-155

PSORT result

Localization	Certainty	PSORT said
Not Clear

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