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IDSCAB87581 TypeCDS
From378558 nt length285
To378274 aa length94
GenecspD pI7.52
Definitionputative cold shock protein M.W (Da)10307
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4154 putative cold shock protein1272.0e-31
coelSCO4684 scoF3 cold shock protein1342.0e-33

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain30-9399.56.3e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037728877.1 cold-shock protein [Streptomyces scabiei] >gb 3481.3e-42
AJT69963.3 Cold shock protein ScoF [Streptomyces lydicus] 3459.4e-42
WP_076972349.1 cold-shock protein [Streptomyces sp. M1013] >gb 3393.3e-41
WP_018540241.1 cold-shock protein [Streptomyces sp. MspMP-M5] 3384.8e-41
WP_003974279.1 MULTISPECIES: cold-shock protein [Streptomycetaceae] >ref 3375.6e-41
WP_030817331.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3367.1e-41
WP_073934532.1 cold-shock protein [Streptomyces sp. CB02400] >gb 3367.8e-41
WP_031136836.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3341.4e-40
WP_028810498.1 cold-shock protein [Streptomyces flavidovirens] 3341.7e-40
WP_057577987.1 cold-shock protein [Streptomyces sp. Root264] >gb 3332.0e-40

PSORT result

LocalizationCertaintyPSORT said
Not Clear