-- | --

IDSCAB87601 TypeCDS
From378012 nt length1494
To376519 aa length497
Gene pI11.92
Definitionputative ATP-dependent RNA helicase M.W (Da)53120
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4155 putative ATP-dependent RNA helicase7810.0e+00
coelSCO5920 undefined product8570.0e+00
sgrSGR_3511 putative ATP-dependent RNA helicase6950.0e+00
saceSACE_5942 ATP-dependent RNA helicase4411.0e-124
nfarnfa25160 putative RNA helicase4362.0e-123

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase93-260143.16.8e-42

Helicase_C1Helicase conserved C-terminal domain302-40389.41.7e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060879800.1 ATP-dependent helicase [Streptomyces scabiei] 22020.0e+00
WP_023586104.1 ATP-dependent helicase [Streptomyces thermolilacinus] >gb 20210.0e+00
WP_055572578.1 ATP-dependent helicase [Streptomyces emeiensis] >emb 20180.0e+00
WP_030349159.1 ATP-dependent helicase, partial [Streptomyces sp. NRRL S-102... 20170.0e+00
WP_055693159.1 ATP-dependent helicase [Streptomyces prasinopilosus] 20150.0e+00
WP_030349160.1 ATP-dependent helicase, partial [Streptomyces sp. NRRL S-102... 20130.0e+00
WP_031144146.1 MULTISPECIES: ATP-dependent helicase [Streptomyces] >gb 20080.0e+00
WP_086747371.1 ATP-dependent helicase [Streptomyces scabiei] 20070.0e+00
WP_067385814.1 ATP-dependent helicase [Streptomyces olivochromogenes] >gb 20070.0e+00
WP_062666995.1 MULTISPECIES: ATP-dependent helicase [Streptomyces] >gb 20010.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear