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IDSCO0038 TypeCDS
From8636234 nt length129
To8636362 aa length42
Gene pI4.45
Definitionputative sigma factor M.W (Da)4591
NoteSCJ4.19c AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
PSK58552.1 ECF RNA polymerase sigma factor SigJ [Streptomyces sp. 111WW2] 2171.2e-22
TYP02... 2151.7e-22
2135.2e-22
GGL86632.1 hypothetical protein GCM10010095_84270 [Streptomyces anthocyanic... 2135.4e-22
WP_063481063.1 RNA polymerase sigma-70 factor [Streptomyces ambofaciens] >g... 2032.5e-18
WP_053126304.1 RNA polymerase sigma-70 factor [Streptomyces ambofaciens] >g... 2032.7e-18
WP_122619455.1 RNA polymerase sigma-70 factor [Streptomyces sp. Tu 4128] 1991.0e-17
WP_161331247.1 RNA polymerase sigma-70 factor [Streptomyces sp. SID5789] >g... 1936.5e-17
WP_031517435.1 RNA polymerase sigma-70 factor [Streptomyces sp. NRRL F-5123... 1761.9e-14
WP_189745489.1 RNA polymerase sigma-70 factor [Streptomyces tendae] >dbj 1752.6e-14

PSORT result

LocalizationCertaintyPSORT said
Not Clear