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IDSCO0148 TypeCDS
From8528041 nt length246
To8527796 aa length81
Gene pI5.84
Definitionputative transcriptional regulatory protein M.W (Da)8910
NoteSCJ33.12 AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_63 putative transcriptional regulatory protein1173.0e-28
samSAM23877_4016 putative HTH-type transcriptional regulator YozG1281.0e-41
scabSCAB87431 putative transcriptional regulatory protein1321.0e-32
saceSACE_0542 transcriptional regulator, XRE family1202.0e-29

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_261Cro/C1-type HTH DNA-binding domain7-6871.94.1e-20

HTH_31Helix-turn-helix13-6227.42.3e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003978728.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 4112.6e-51
WP_030870969.1 helix-turn-helix transcriptional regulator [Streptomyces vio... 4089.2e-51
WP_121712463.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 4079.5e-51
WP_007387365.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3922.0e-48
KDN75909.1 transcriptional regulator [Streptomyces olindensis] 3904.9e-48
WP_109031306.1 helix-turn-helix transcriptional regulator [Streptomyces rub... 3843.7e-47
WP_114256902.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 3843.8e-47
WP_186779074.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 3826.7e-47
WP_164285342.1 helix-turn-helix transcriptional regulator [Streptomyces roc... 3819.3e-47
WP_102930112.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 3801.3e-46

PSORT result

LocalizationCertaintyPSORT said
Not Clear