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IDSCO0236 TypeCDS
From8442232 nt length873
To8443104 aa length290
Gene pI7.42
Definitionputative DNA-binding protein M.W (Da)32305
NoteSCJ9A.15c AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1971 putative DNA-binding protein4231.0e-119

*avm, Streptomyces avermitilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain8-8560.41.4e-16

HTH_31Helix-turn-helix37-7935.47.2e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003978631.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13180.0e+00
WP_136207259.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13140.0e+00
WP_193484213.1 helix-turn-helix domain-containing protein [Streptomyces ant... 13140.0e+00
WP_164277874.1 helix-turn-helix domain-containing protein [Streptomyces rub... 12962.0e-179
WP_109031186.1 helix-turn-helix domain-containing protein [Streptomyces rub... 12952.4e-179
WP_121717021.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12866.7e-178
MYS71352.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 12771.8e-176
WP_161376434.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12721.1e-175
WP_127891735.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12711.8e-175
WP_087811586.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12607.4e-174

PSORT result

LocalizationCertaintyPSORT said
Not Clear