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IDSCO0255 TypeCDS
From8421836 nt length1737
To8423572 aa length578
Gene pI8.41
Definitionputative transcriptional regulator M.W (Da)61609
NoteSCJ9A.34c SCF20.01c AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1392 putative transcriptional regulator2335.0e-62
nfarnfa12030 putative transcriptional regulator1667.0e-42

*avm, Streptomyces avermitilis; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_81Bacterial regulatory protein, Fis family531-57044.68e-12

Sigma54_activat1Sigma-54 interaction domain311-36323.04.7e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAD55431.1 putative sigma factor [Streptomyces coelicolor A3(2)] 25470.0e+00
WP_030862222.1 MULTISPECIES: sigma 54-interacting transcriptional regulator... 25450.0e+00
WP_189285351.1 GAF domain-containing protein [Streptomyces anthocyanicus] >... 25390.0e+00
WP_016325039.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 25380.0e+00
WP_193484228.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 25380.0e+00
EFD71702.1 sigma factor [Streptomyces lividans TK24] >gb 25360.0e+00
WP_093455327.1 MULTISPECIES: sigma 54-interacting transcriptional regulator... 25350.0e+00
WP_121717050.1 GAF domain-containing protein [Streptomyces sp. E5N91] 25130.0e+00
WP_109031480.1 sigma 54-interacting transcriptional regulator [Streptomyces... 24650.0e+00
WP_104630586.1 sigma 54-interacting transcriptional regulator [Streptomyces... 24510.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear