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IDSCO0287 TypeCDS
From8387817 nt length1005
To8386813 aa length334
Gene pI8.84
Definitionputative DNA-binding regulator protein M.W (Da)36589
NoteSCF85.15 AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_7274 putative regulatory protein5350.0e+00
scabSCAB20531 putative transcriptional regulator1195.0e-28
nfarnfa27830 putative transcriptional regulator1363.0e-33

*sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AraC_binding_21AraC-binding-like domain20-19476.12.3e-21

HTH_181Helix-turn-helix domain234-31463.71.3e-17

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family281-31338.11.1e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EOY44959.1 hypothetical protein SLI_0240 [Streptomyces lividans 1326] 17350.0e+00
WP_011026990.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 17350.0e+00
WP_037666983.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 17290.0e+00
WP_191848967.1 helix-turn-helix domain-containing protein [Streptomyces ant... 17280.0e+00
WP_189285342.1 helix-turn-helix domain-containing protein [Streptomyces ant... 17200.0e+00
WP_106517036.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 17190.0e+00
WP_121714425.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 17150.0e+00
EFD71671.1 regulatory protein [Streptomyces lividans TK24] 17070.0e+00
WP_087803967.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 16300.0e+00
WP_109031141.1 helix-turn-helix domain-containing protein [Streptomyces rub... 16080.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear