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IDSCO0891 TypeCDS
From7731077 nt length840
To7730238 aa length279
Gene pI9.41
Definitionputative DNA-binding protein M.W (Da)30433
NoteSCM1.24 AseI frg.M
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_6665 putative DNA-binding protein2193.0e-58
scabSCAB5751 2294.0e-61
nfarnfa5020 putative DNA-binding protein1701.0e-43

*sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain5-8452.73.7e-14

HTH_31Helix-turn-helix30-8035.38e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EFD71064.1 DNA-binding protein [Streptomyces lividans TK24] >dbj 12542.5e-173
WP_011027420.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12542.7e-173
WP_191848860.1 helix-turn-helix domain-containing protein [Streptomyces ant... 12472.6e-172
WP_189282775.1 helix-turn-helix domain-containing protein [Streptomyces ant... 12464.4e-172
WP_109030626.1 helix-turn-helix domain-containing protein [Streptomyces rub... 12361.4e-170
WP_121713851.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12333.7e-170
WP_115740620.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12264.5e-169
WP_217168517.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11882.2e-163
WP_159326077.1 helix-turn-helix domain-containing protein [Streptomyces ten... 11761.5e-161
WP_164457565.1 helix-turn-helix domain-containing protein [Streptomyces ten... 11752.5e-161

PSORT result

LocalizationCertaintyPSORT said
Not Clear