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IDSCO0925 TypeCDS
From7696116 nt length885
To7695232 aa length294
Gene pI9.23
Definitionputative lysR-family transcriptional regulator M.W (Da)32096
NoteSCM10.13 AseI frg.M
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7306 putative LysR-family transcriptional regulator4753.0e-135
sgrSGR_708 putative LysR-family transcriptional regulator4631.0e-131
samSAM23877_6615 putative lysR-family transcriptional regulator5500.0e+00
scabSCAB11491 putative LysR-family transcriptional regulator5277.0e-151
nfarnfa30720 putative transcriptional regulator1294.0e-31

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain87-293159.18.2e-47

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family3-6282.41.4e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977934.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13620.0e+00
WP_007389254.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13570.0e+00
WP_052842528.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13560.0e+00
WP_210977052.1 LysR family transcriptional regulator [Streptomyces sp. RM72... 13560.0e+00
WP_153176707.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 13560.0e+00
WP_115740647.1 LysR family transcriptional regulator [Streptomyces sp. CB09... 13540.0e+00
WP_186779714.1 LysR family transcriptional regulator [Streptomyces sp. SS06... 13530.0e+00
WP_217168548.1 LysR family transcriptional regulator [Streptomyces sp. AC51... 13520.0e+00
WP_087805224.1 LysR family transcriptional regulator [Streptomyces sp. CS11... 13520.0e+00
WP_093455534.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13510.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear