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IDSCO1242 TypeCDS
From7353652 nt length861
To7352792 aa length286
Gene pI6.52
Definitionputative DNA-binding protein M.W (Da)30970
Note2SCG1.17 AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7096 putative DNA-binding protein4161.0e-117
sgrSGR_6285 putative DNA-binding protein3671.0e-102
samSAM23877_1330 putative DNA-binding protein5230.0e+00
scabSCAB78261 putative DNA-binding protein4561.0e-129

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain12-7259.33.1e-16

HTH_31Helix-turn-helix16-6731.99.4e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977589.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14630.0e+00
WP_136208568.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14580.0e+00
WP_193484707.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14530.0e+00
MYS74261.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 14400.0e+00
WP_109030277.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14330.0e+00
WP_115740929.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14170.0e+00
WP_127894214.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14080.0e+00
WP_087810607.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14010.0e+00
WP_030181731.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13990.0e+00
WP_189744157.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13970.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear