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IDSCO1276 TypeCDS
From7320815 nt length597
To7320219 aa length198
GenesigJ pI8.51
DefinitionRNA polymerase ECF sigma factor M.W (Da)22530
Note2SCG18.23 AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_1357 putative RNA polymerase ECF sigma factor2612.0e-91

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 244-10550.51.2e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AAF35371.1 RNA polymerase ECF sigma factor [Streptomyces coelicolor] >gb 8683.5e-117
WP_125633514.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 8666.7e-117
WP_102932812.1 sigma-70 family RNA polymerase sigma factor [Streptomyces di... 8641.2e-116
WP_115740981.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 8632.2e-116
WP_193484733.1 sigma-70 family RNA polymerase sigma factor [Streptomyces an... 8614.2e-116
WP_212729457.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 8605.5e-116
WP_121713715.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 8581.3e-115
WP_073731375.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 8571.5e-115
WP_164418770.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 8562.0e-115
WP_109030245.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ru... 8562.4e-115

PSORT result

LocalizationCertaintyPSORT said
Not Clear