-- | --

IDSCO1312 TypeCDS
From7278027 nt length606
To7278632 aa length201
Gene pI5.27
Definitionputative transcriptional regulatory protein M.W (Da)21519
NoteSCBAC36F5.23c AseI frg.G
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7041 putative transcriptional regulatory protein3176.0e-88
sgrSGR_6244 putative transcriptional regulator2652.0e-72
samSAM23877_1387 putative transcriptional regulatory protein3538.0e-127
scabSCAB77741 putative transcriptional regulatory protein2944.0e-81
saceSACE_2132 transcriptional regulator, Cro/CI family1223.0e-29

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Cupin_21Cupin domain125-19362.22.6e-17

HTH_31Helix-turn-helix26-7947.99.3e-13

HTH_311Helix-turn-helix domain22-7641.89.4e-11

HTH_191Helix-turn-helix domain24-8239.53.9e-10

HTH_261Cro/C1-type HTH DNA-binding domain28-8523.93.9e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977517.1 MULTISPECIES: XRE family transcriptional regulator [Streptom... 10309.0e-142
AXL87450.1 transcriptional regulator [Streptomyces sp. CB09001] 10072.3e-138
WP_203696231.1 XRE family transcriptional regulator [Streptomyces rubrogris... 9961.3e-136
WP_016325714.1 MULTISPECIES: XRE family transcriptional regulator [Streptom... 9672.0e-132
WP_162832996.1 XRE family transcriptional regulator [Streptomyces sp. CB090... 9569.9e-131
WP_174855016.1 XRE family transcriptional regulator [Streptomyces rubrogris... 9516.7e-130
WP_087812200.1 XRE family transcriptional regulator [Streptomyces sp. CS113... 9463.5e-129
WP_203713703.1 XRE family transcriptional regulator [Streptomyces diastatic... 9474.2e-129
NEC34491.1 helix-turn-helix domain-containing protein [Streptomyces rubrogri... 9454.9e-129
KOT98226.1 transcriptional regulator [Streptomyces sp. NRRL F-4711] >gb 9422.4e-128

PSORT result

LocalizationCertaintyPSORT said
Not Clear