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IDSCO1421 TypeCDS
From7150124 nt length375
To7149750 aa length124
Gene pI5.34
Definitionhypothetical protein M.W (Da)14123
NoteSC6D7.18c AseI frg.G
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6925 hypothetical protein2196.0e-59
sgrSGR_6111 conserved hypothetical protein2251.0e-60
samSAM23877_1481 RNA polymerase-binding protein RbpA2531.0e-89
scabSCAB75841 hypothetical protein2312.0e-62
saceSACE_2290 hypothetical protein1175.0e-28

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RbpA1RNA polymerase-binding protein4-107142.45.7e-42

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030677841.1 MULTISPECIES: RNA polymerase-binding protein RbpA [Streptomy... 5173.9e-66
WP_003977404.1 MULTISPECIES: RNA polymerase-binding protein RbpA [Terrabact... 5157.5e-66
WP_010468770.1 MULTISPECIES: RNA polymerase-binding protein RbpA [Streptomy... 5141.0e-65
WP_010046329.1 MULTISPECIES: RNA polymerase-binding protein RbpA [Streptomy... 5141.1e-65
WP_010357981.1 MULTISPECIES: RNA polymerase-binding protein RbpA [Streptomy... 5131.8e-65
WP_058941040.1 RNA polymerase-binding protein RbpA [Streptomyces kanasensis... 5132.0e-65
WP_121789819.1 RNA polymerase-binding protein RbpA [Streptomyces sp. Z022] ... 5122.2e-65
WP_042173984.1 MULTISPECIES: RNA polymerase-binding protein RbpA [unclassif... 5122.3e-65
WP_112468018.1 RNA polymerase-binding protein RbpA [Streptomyces triticisol... 5122.4e-65
WP_046709182.1 RNA polymerase-binding protein RbpA [Streptomyces europaeisc... 5122.4e-65

PSORT result

LocalizationCertaintyPSORT said
Not Clear