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IDSCO1508 TypeCDS
From7054065 nt length1278
To7055342 aa length425
GenehisS pI4.81
DefinitionhisS histidyl tRNA synthetase M.W (Da)46476
NoteSC9C5.32c AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6844 putative histidyl-tRNA synthetase7520.0e+00
sgrSGR_6026 putative histidyl-tRNA synthetase7240.0e+00
samSAM23877_1560 Histidine--tRNA ligase8240.0e+00
scabSCAB75001 putative histidyl-tRNA synthetase7690.0e+00
saceSACE_2032 histidyl-tRNA synthetase4554.0e-129
nfarnfa36640 putative histidyl-tRNA synthetase4514.0e-128

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

tRNA-synt_His1Histidyl-tRNA synthetase14-314143.76.8e-42

tRNA-synt_2b1tRNA synthetase class II core domain (G, H, P, S and T)72-31866.42.8e-18

HGTP_anticodon1Anticodon binding domain336-42246.72.4e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
Q9KXP2.1 RecName: Full=Histidine--tRNA ligase; AltName: Full=Histidyl-tRNA s... 20700.0e+00
WP_016325801.1 MULTISPECIES: histidine--tRNA ligase [Streptomyces] >gb 20400.0e+00
WP_191849211.1 histidine--tRNA ligase [Streptomyces anthocyanicus] >dbj 20340.0e+00
WP_121716480.1 histidine--tRNA ligase [Streptomyces sp. E5N91] 20340.0e+00
WP_161380460.1 MULTISPECIES: histidine--tRNA ligase [unclassified Streptomy... 20260.0e+00
WP_059299537.1 MULTISPECIES: histidine--tRNA ligase [Streptomyces] >lcl 20250.0e+00
WP_109033939.1 histidine--tRNA ligase [Streptomyces rubrogriseus] >gb 20240.0e+00
WP_104634804.1 histidine--tRNA ligase [Streptomyces sp. MH60] >gb 20240.0e+00
WP_197923845.1 histidine--tRNA ligase [Streptomyces sp. HB-N217] >lcl 20240.0e+00
WP_125633205.1 MULTISPECIES: histidine--tRNA ligase [unclassified Streptomy... 20220.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear