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IDSCO1516 TypeCDS
From7044792 nt length1713
To7046504 aa length570
GenesecD pI6.03
DefinitionsecD protein-export membrane protein M.W (Da)59511
NoteSCL2.06c AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6837 putative preprotein translocase SecD subunit6930.0e+00
sgrSGR_6019 protein-export membrane protein SecD7040.0e+00
samSAM23877_1567 Protein translocase subunit SecD9980.0e+00
scabSCAB74911 putative preprotein translocase SecD subunit7670.0e+00
saceSACE_2025 preprotein translocase subunit SecD2742.0e-74
nfarnfa36910 putative protein exporter membrane protein2959.0e-81

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SecD_SecF1Protein export membrane protein352-52744.11.3e-11

MMPL1MMPL family372-53235.35.3e-09

Sec_GG1SecD/SecF GG Motif5-2520.80.00017

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202492881.1 protein translocase subunit SecD [Streptomyces sp. SID7813] 21880.0e+00
Q53955.2 RecName: Full=Protein translocase subunit SecD [Streptomyces coelic... 21860.0e+00
CAA59954.1 secD [Streptomyces coelicolor A3(2)] 21830.0e+00
WP_193485785.1 protein translocase subunit SecD [Streptomyces anthocyanicus... 21800.0e+00
WP_037897924.1 MULTISPECIES: protein translocase subunit SecD [Streptomyces... 21790.0e+00
WP_217437836.1 protein translocase subunit SecD [Streptomyces coelicolor] 21780.0e+00
WP_210984454.1 protein translocase subunit SecD [Streptomyces sp. RK76] >lc... 21760.0e+00
QFI47640.1 protein translocase subunit SecD [Streptomyces coelicolor A3(2)] 21750.0e+00
WP_202559972.1 protein translocase subunit SecD [Streptomyces sp. SID5914] 21680.0e+00
WP_016325804.1 MULTISPECIES: protein translocase subunit SecD [Streptomyces... 21670.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear