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IDSCO1518 TypeCDS
From7042799 nt length1074
To7043872 aa length357
GeneruvB pI4.7
DefinitionruvB holliday junction DNA helicase M.W (Da)37941
NoteSCL2.08c AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6835 putative Holliday junction DNA helicase subunit A5847.0e-168
sgrSGR_6017 putative Holliday junction DNA helicase subunit A5976.0e-172
samSAM23877_1569 ATP-dependent DNA helicase%2C component of RuvABC resolvasome6540.0e+00
scabSCAB74891 putative Holliday junction DNA helicase subunit A6300.0e+00
saceSACE_2023 Holliday junction DNA helicase RuvB4131.0e-116
nfarnfa36950 putative Holliday junction DNA helicase A subunit4254.0e-120

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RuvB_N1Holliday junction DNA helicase ruvB N-terminus16-247361.81.1e-108

RuvB_C1Holliday junction DNA helicase ruvB C-terminus265-338101.51.4e-29

AAA1ATPase family associated with various cellular activities (AAA)67-18758.58e-16

AAA_51AAA domain (dynein-related subfamily)66-18435.01.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYS73154.1 Holliday junction branch migration DNA helicase RuvB [Streptomyce... 15160.0e+00
WP_003977309.1 MULTISPECIES: Holliday junction branch migration DNA helicas... 15140.0e+00
NEC33734.1 Holliday junction branch migration DNA helicase RuvB [Streptomyce... 15100.0e+00
WP_210984453.1 Holliday junction branch migration DNA helicase RuvB [Strept... 15090.0e+00
WP_202492883.1 MULTISPECIES: Holliday junction branch migration DNA helicas... 15070.0e+00
NEB13647.1 Holliday junction branch migration DNA helicase RuvB [Streptomyce... 15060.0e+00
WP_104634795.1 Holliday junction branch migration DNA helicase RuvB [Strept... 15040.0e+00
WP_127893541.1 MULTISPECIES: Holliday junction branch migration DNA helicas... 15040.0e+00
WP_121716491.1 Holliday junction branch migration DNA helicase RuvB [Strept... 15040.0e+00
WP_203695925.1 Holliday junction branch migration DNA helicase RuvB [Strept... 15020.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear