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IDSCO1537 TypeCDS
From7020598 nt length912
To7021509 aa length303
Gene pI8.03
Definitionputative transport system inner membrane protein M.W (Da)33123
NoteSCL2.27c AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6814 putative multiple sugar ABC transporter permease protein4431.0e-125
samSAM23877_1589 putative ABC transporter permease protein YesQ5650.0e+00
scabSCAB74661 putative ABC transporter permease protein5361.0e-153

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component118-29478.16.1e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_093455777.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 12115.2e-166
WP_153180716.1 carbohydrate ABC transporter permease [Streptomyces sp. SYP-... 12115.3e-166
WP_164274873.1 carbohydrate ABC transporter permease [Streptomyces rubrogri... 12115.4e-166
WP_003977289.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 12116.0e-166
WP_109033890.1 carbohydrate ABC transporter permease [Streptomyces rubrogri... 12107.9e-166
WP_193485795.1 carbohydrate ABC transporter permease [Streptomyces anthocya... 12099.1e-166
WP_042825790.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 12081.3e-165
WP_108989260.1 carbohydrate ABC transporter permease [Streptomyces coelicof... 12081.5e-165
MYS78426.1 ABC transporter permease subunit [Streptomyces sp. SID5926] 12072.2e-165
WP_226026085.1 carbohydrate ABC transporter permease [Streptomyces hyderaba... 12062.5e-165

PSORT result

LocalizationCertaintyPSORT said
Not Clear