-- | --

IDSCO1558 TypeCDS
From6996836 nt length723
To6997558 aa length240
Gene pI10.18
Definitionputative ABC transporter permease protein M.W (Da)25265
NoteSCL11.14c AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6790 putative ABC transporter permease protein3131.0e-86
sgrSGR_5979 putative ABC transporter permease protein2592.0e-70
samSAM23877_1613 DL-methionine transporter subunit%2C membrane component protein of ABC superfamily3833.0e-137
scabSCAB74411 putative ABC transporter permease protein3362.0e-93
saceSACE_0805 putative ABC transport system permease protein1101.0e-25
nfarnfa44100 putative ABC transporter permease protein1084.0e-25

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component27-21368.07.7e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027847.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 7281.3e-94
MYS70847.1 methionine ABC transporter permease MetI [Streptomyces sp. SID592... 7271.8e-94
WP_059299584.1 MULTISPECIES: ABC transporter permease [Streptomyces] >lcl 7281.9e-94
WP_193783355.1 ABC transporter permease [Streptomyces sp. E5N91] 7282.0e-94
WP_171987064.1 ABC transporter permease [Streptomyces sp. M1013] >gb 7272.3e-94
WP_030871141.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 7262.9e-94
WP_003977266.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 7263.1e-94
AXL93129.1 ABC transporter permease [Streptomyces sp. CB09001] 7253.6e-94
WP_162495120.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 7254.3e-94
WP_203697013.1 ABC transporter permease [Streptomyces rubrogriseus] 7237.8e-94

PSORT result

LocalizationCertaintyPSORT said
Not Clear