-- | --

IDSCO1598 TypeCDS
From6956794 nt length384
To6957177 aa length127
GenerplT pI11.48
Definition50S ribosomal protein L20 M.W (Da)14354
Note AseI frg.L
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6739 putative ribosomal protein L201851.0e-48
sgrSGR_5907 putative ribosomal protein L202437.0e-66
samSAM23877_1654 50S ribosomal subunit protein L202461.0e-86
scabSCAB73981 putative ribosomal protein L202381.0e-64
saceSACE_5279 50S ribosomal subunit protein L201482.0e-37
nfarnfa19160 putative ribosomal protein L201481.0e-37

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_L201Ribosomal protein L203-109153.12.1e-45

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977226.1 MULTISPECIES: 50S ribosomal protein L20 [Streptomyces] >sp 6477.8e-86
WP_217170727.1 50S ribosomal protein L20 [Streptomyces sp. AC512_CC834] 6451.3e-85
WP_200261503.1 50S ribosomal protein L20 [Streptomyces sp. HSG2] 6432.9e-85
WP_031035556.1 MULTISPECIES: 50S ribosomal protein L20 [Streptomyces] >gb 6433.0e-85
WP_210922300.1 50S ribosomal protein L20 [Streptomyces sp. B93] >lcl 6416.3e-85
WP_017945472.1 MULTISPECIES: 50S ribosomal protein L20 [Streptomyces] >gb 6408.1e-85
WP_006141703.1 MULTISPECIES: 50S ribosomal protein L20 [Streptomyces] >gb 6401.0e-84
WP_055699044.1 MULTISPECIES: 50S ribosomal protein L20 [Streptomyces] 6391.2e-84
WP_071267962.1 MULTISPECIES: 50S ribosomal protein L20 [Streptomyces] >lcl 6391.3e-84
WP_126899359.1 50S ribosomal protein L20 [Streptomyces sp. WAC 01325] >gb 6391.3e-84

PSORT result

LocalizationCertaintyPSORT said
Not Clear