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IDSCO1616 TypeCDS
From6938104 nt length978
To6939081 aa length325
Gene pI10.95
Definitionputative transcriptional regulator M.W (Da)33489
NoteSCI35.38c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6722 putative LysR-family transcriptional regulator3862.0e-108
sgrSGR_5895 putative LysR-family transcriptional regulator4348.0e-123
samSAM23877_1670 hypothetical protein5030.0e+00
scabSCAB73811 putative LysR-family transcriptional regulator4501.0e-127
saceSACE_3775 LysR-family transcriptional regulator2285.0e-61
nfarnfa43900 putative transcriptional regulator1779.0e-46

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain125-323143.93.8e-42

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family41-9774.06.2e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_115741261.1 LysR family transcriptional regulator [Streptomyces sp. CB09... 11499.5e-156
WP_003977210.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 11471.7e-155
WP_121711663.1 LysR family transcriptional regulator [Streptomyces sp. E5N9... 11428.5e-155
MYS69227.1 LysR family transcriptional regulator [Streptomyces sp. SID5926] 11411.5e-154
WP_189283960.1 LysR family transcriptional regulator [Streptomyces anthocya... 11382.9e-154
KYK12183.1 LysR family transcriptional regulator [Streptomyces sp. CC71] >gb... 11322.9e-153
RSS01529.1 LysR family transcriptional regulator [Streptomyces sp. WAC04189] 11313.4e-153
QCR46670.1 LysR family transcriptional regulator [Streptomyces sp. SGAir0924... 11313.6e-153
WP_029393192.1 LysR family transcriptional regulator [Streptomyces sp. A144... 11304.6e-153
RSS21562.1 LysR family transcriptional regulator [Streptomyces sp. WAC05458]... 11305.0e-153

PSORT result

LocalizationCertaintyPSORT said
Not Clear