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IDSCO1622 TypeCDS
From6931352 nt length906
To6930447 aa length301
Gene pI4.76
Definitionputative 5’-3’ exonuclease M.W (Da)31915
NoteSCI41.05 AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6714 putative 5'-3' exonuclease4793.0e-136
sgrSGR_5889 putative 5^-3^ exonuclease4731.0e-134
samSAM23877_1677 5'-3' exonuclease5210.0e+00
scabSCAB73781 putative 5'-3' exonuclease4901.0e-139
saceSACE_2270 potential 5'-3' exonuclease2489.0e-67
nfarnfa31600 putative 5'-3' exonuclease1885.0e-49

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

5_3_exonuc_N15'-3' exonuclease, N-terminal resolvase-like domain1-177164.61.5e-48

5_3_exonuc15'-3' exonuclease, C-terminal SAM fold182-26468.55.4e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027889.1 MULTISPECIES: 5'-3' exonuclease [Streptomyces] >sp 14660.0e+00
NSL83134.1 5'-3' exonuclease [Streptomyces coelicolor] >gb 14660.0e+00
EFD70293.1 5'-3' exonuclease [Streptomyces lividans TK24] >gb 14650.0e+00
WP_016325848.1 MULTISPECIES: 5'-3' exonuclease [Streptomyces] >gb 14640.0e+00
WP_121711683.1 5'-3' exonuclease [Streptomyces sp. E5N91] 14550.0e+00
WP_109034116.1 5'-3' exonuclease [Streptomyces rubrogriseus] >gb 14470.0e+00
NEC38383.1 5'-3' exonuclease [Streptomyces rubrogriseus] 14460.0e+00
WP_104633832.1 5'-3' exonuclease [Streptomyces sp. MH60] >gb 14190.0e+00
AIV37406.1 5'-3' exonuclease [Streptomyces sp. CCM_MD2014] 14160.0e+00
WP_107072138.1 5'-3' exonuclease [Streptomyces sp. CCM_MD2014] 14140.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear