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IDSCO1625 TypeCDS
From6928411 nt length975
To6927437 aa length324
Gene pI10.38
Definitionputative ribosomal pseudouridine synthase M.W (Da)35566
NoteSCI41.08 AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6707 putative ribosomal pseudouridine synthase4271.0e-120
sgrSGR_5826 putative ribosomal pseudouridine synthase3732.0e-104
samSAM23877_1680 Ribosomal pseudouridine synthase5080.0e+00
scabSCAB73731 putative ribosomal pseudouridine synthase4162.0e-117
saceSACE_3351 ribosomal pseudouridine synthase3618.0e-101
nfarnfa7490 putative RNA pseudouridylate synthase3262.0e-90

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PseudoU_synth_21RNA pseudouridylate synthase103-25261.49.8e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EOY46644.1 ribosomal pseudouridine synthase [Streptomyces lividans 1326] 15530.0e+00
WP_003977201.1 MULTISPECIES: RluA family pseudouridine synthase [Streptomyc... 15520.0e+00
WP_136207462.1 MULTISPECIES: RluA family pseudouridine synthase [Streptomyc... 15480.0e+00
WP_121711677.1 RluA family pseudouridine synthase [Streptomyces sp. E5N91] 15350.0e+00
WP_164278558.1 RluA family pseudouridine synthase [Streptomyces rubrogriseu... 15190.0e+00
WP_109033674.1 RluA family pseudouridine synthase [Streptomyces rubrogriseu... 15120.0e+00
WP_115741268.1 RluA family pseudouridine synthase [Streptomyces sp. CB09001... 14770.0e+00
MYS69973.1 pseudouridylate synthase [Streptomyces sp. SID5926] 14690.0e+00
WP_076973575.1 RluA family pseudouridine synthase [Streptomyces sp. M1013] ... 14300.0e+00
WP_059299647.1 MULTISPECIES: RluA family pseudouridine synthase [Streptomyc... 14300.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear