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IDSCO1697 TypeCDS
From6848630 nt length528
To6849157 aa length175
Gene pI8.39
Definitionputative soxR-like transcriptional regulator M.W (Da)19325
NoteSCI30A.18c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6604 putative MerR-family transcriptional regulator2452.0e-66
sgrSGR_5803 putative SoxR-like transcriptional regulator2512.0e-68
samSAM23877_1757 MerR family transcriptional regulator2973.0e-105
scabSCAB72741 putative MerR-family transcriptional regulator2731.0e-74
saceSACE_5764 transcriptional regulator, MerR family1523.0e-38
nfarnfa49080 putative transcriptional regulator1792.0e-46

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MerR-DNA-bind1MerR, DNA binding53-11867.21.3e-18

MerR1MerR family regulatory protein12-4848.25.9e-13

MerR_11MerR HTH family regulatory protein12-7846.33.1e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977128.1 MULTISPECIES: redox-sensitive transcriptional activator SoxR... 7834.6e-105
WP_121710846.1 redox-sensitive transcriptional activator SoxR [Streptomyces... 7783.0e-104
WP_115741326.1 redox-sensitive transcriptional activator SoxR [Streptomyces... 7635.4e-102
MYS70470.1 redox-sensitive transcriptional activator SoxR [Streptomyces sp. ... 7636.1e-102
WP_109033615.1 redox-sensitive transcriptional activator SoxR [Streptomyces... 7566.5e-101
WP_061445592.1 MULTISPECIES: redox-sensitive transcriptional activator SoxR... 7351.2e-97
WP_164413042.1 redox-sensitive transcriptional activator SoxR [Streptomyces... 7341.4e-97
WP_087791792.1 redox-sensitive transcriptional activator SoxR [Streptomyces... 7341.5e-97
WP_102930297.1 MULTISPECIES: redox-sensitive transcriptional activator SoxR... 7305.5e-97
WP_042822123.1 redox-sensitive transcriptional activator SoxR [Streptomyces... 7305.7e-97

PSORT result

LocalizationCertaintyPSORT said
Not Clear