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IDSCO1702 TypeCDS
From6845708 nt length642
To6845067 aa length213
Gene pI5.55
Definitionputative transcriptional regulator M.W (Da)22951
NoteSCI30A.23 AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6599 putative TetR-family transcriptional regulator3577.0e-100
sgrSGR_5798 putative TetR-family transcriptional regulator3223.0e-89
samSAM23877_1762 Transcriptional regulator3983.0e-144
scabSCAB72671 putative TetR-family transcriptional regulator3731.0e-104
saceSACE_5700 TetR-family transcriptional regulator1871.0e-48

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TetR_C1Tetracyclin repressor, C-terminal all-alpha domain75-20563.02.5e-17

TetR_N1Bacterial regulatory proteins, tetR family14-6053.11.8e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AIJ16746.1 transcriptional regulator [Streptomyces lividans TK24] >gb 9426.6e-128
WP_003977123.1 MULTISPECIES: TetR/AcrR family transcriptional regulator C-t... 9409.3e-128
9374.0e-127
WP_087791788.1 MULTISPECIES: TetR/AcrR family transcriptional regulator C-t... 9364.0e-127
KPC68675.1 TetR family transcriptional regulator [Streptomyces sp. NRRL WC-3... 9364.8e-127
WP_109033612.1 MULTISPECIES: TetR/AcrR family transcriptional regulator C-t... 9347.5e-127
WP_108989195.1 TetR/AcrR family transcriptional regulator C-terminal domain... 9331.1e-126
WP_164244760.1 TetR/AcrR family transcriptional regulator C-terminal domain... 9331.5e-126
EHN79407.1 transcriptional regulator [Streptomyces coelicoflavus ZG0656] 9312.4e-126
WP_042822125.1 MULTISPECIES: TetR/AcrR family transcriptional regulator C-t... 9303.6e-126

PSORT result

LocalizationCertaintyPSORT said
Not Clear