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IDSCO1703 TypeCDS
From6845003 nt length714
To6844290 aa length237
Gene pI8.79
Definitionputative transcriptional regulator M.W (Da)24942
NoteSCI30A.24 AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6598 putative ArsR-family transcriptional regulator3122.0e-86
sgrSGR_4281 putative ArsR-family transcriptional regulator2024.0e-53
samSAM23877_1763 Transcriptional regulator%2C ArsR family3876.0e-139
saceSACE_0701 ArsR-family transcriptional regulator2192.0e-58

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_201Helix-turn-helix domain13-7237.61.6e-09

HTH_51Bacterial regulatory protein, arsR family20-6527.91.4e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027927.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 9232.6e-124
WP_016325875.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 9172.1e-123
EFD70211.1 transcriptional regulator [Streptomyces lividans TK24] 9172.8e-123
MYS76241.1 metalloregulator ArsR/SmtB family transcription factor [Streptomy... 9014.8e-121
WP_109033611.1 winged helix-turn-helix domain-containing protein [Streptomy... 9007.8e-121
WP_164273797.1 winged helix-turn-helix domain-containing protein [Streptomy... 8921.4e-119
WP_189746558.1 winged helix-turn-helix domain-containing protein [Streptomy... 8782.0e-117
WP_104634675.1 winged helix-turn-helix domain-containing protein [Streptomy... 8755.9e-117
WP_030402876.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 8721.4e-116
WP_210914172.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 8721.5e-116

PSORT result

LocalizationCertaintyPSORT said
Not Clear