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IDSCO1722 TypeCDS
From6824474 nt length753
To6825226 aa length250
Gene pI10.66
Definitionputative membrane protein M.W (Da)26007
NoteSCI11.11c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6583 putative membrane protein2386.0e-64
samSAM23877_1777 hypothetical protein3264.0e-114
scabSCAB72461 hypothetical protein2684.0e-73

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RskA1Anti-sigma-K factor rskA58-240116.12e-33

zf-HC21Putative zinc-finger11-3625.11.4e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003977104.1 MULTISPECIES: anti-sigma factor [Streptomyces] >gb 9131.9e-122
WP_106518501.1 anti-sigma factor [Streptomyces sp. 111WW2] >gb 9044.5e-121
WP_109033593.1 anti-sigma factor [Streptomyces rubrogriseus] 8768.9e-117
WP_189746534.1 anti-sigma factor [Streptomyces tendae] >dbj 8342.0e-110
WP_159325511.1 anti-sigma factor [Streptomyces tendae] 8342.0e-110
WP_164460765.1 anti-sigma factor [Streptomyces tendae] >gb 8308.2e-110
WP_087810169.1 anti-sigma factor [Streptomyces sp. CS113] >gb 8291.3e-109
WP_161381822.1 MULTISPECIES: anti-sigma factor [unclassified Streptomyces] ... 8211.9e-108
WP_115741349.1 anti-sigma factor [Streptomyces sp. CB09001] >gb 8222.4e-108
WP_076973634.1 anti-sigma factor [Streptomyces sp. M1013] >gb 7303.2e-94

PSORT result

LocalizationCertaintyPSORT said
Not Clear