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IDSCO1728 TypeCDS
From6818692 nt length405
To6819096 aa length134
Gene pI9.86
Definitionputative gntR-family transcriptional regulator M.W (Da)14108
NoteSCI11.17c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6565 putative GntR-family transcriptional regulator1461.0e-36
sgrSGR_5781 putative GntR-family transcriptional regulator1483.0e-37
samSAM23877_1789 putative gntR-family transcriptional regulator1914.0e-65
scabSCAB72381 putative GntR-family transcriptional regulator1682.0e-43

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GntR1Bacterial regulatory proteins, gntR family26-8956.41.5e-15

HTH_411Helix-turn-helix domain45-8932.54.2e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011027943.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 5282.1e-67
GHA39841.1 GntR family transcriptional regulator [Streptomyces anthocyanicu... 5272.3e-67
GGL50554.1 GntR family transcriptional regulator [Streptomyces anthocyanicu... 5246.8e-67
AXL87823.1 GntR family transcriptional regulator [Streptomyces sp. CB09001] 5063.7e-64
QIP69638.1 GntR family transcriptional regulator [Streptomyces sp. VN1] >gb 4961.4e-62
WP_109033588.1 GntR family transcriptional regulator [Streptomyces rubrogri... 4942.5e-62
MYS68986.1 GntR family transcriptional regulator [Streptomyces sp. SID5926] 4933.5e-62
OMI90511.1 GntR family transcriptional regulator [Streptomyces sp. M1013] 4933.9e-62
GHA87816.1 GntR family transcriptional regulator [Streptomyces tendae] 4891.4e-61
PAN00009.1 GntR family transcriptional regulator [Streptomyces sp. Alain-F2R... 4882.1e-61

PSORT result

LocalizationCertaintyPSORT said
Not Clear