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IDSCO1758 TypeCDS
From6787210 nt length1479
To6788688 aa length492
Gene pI5.43
Definitionputative GTP binding protein M.W (Da)53232
Note2SCI34.11c AseI frg.I
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6524 putative GTP-binding protein8650.0e+00
sgrSGR_5741 putative GTP-binding protein8690.0e+00
samSAM23877_1816 GTPase Der9410.0e+00
scabSCAB72001 putative GTP-binding protein8970.0e+00
saceSACE_5232 small GTP-binding protein domain5378.0e-154
nfarnfa20130 putative GTP-binding protein5317.0e-152

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MMR_HSR1250S ribosome-binding GTPase56-170, 230-348161.36.9e-48

FeoB_N2Ferrous iron transport protein B56-172, 230-39391.73.1e-26

KH_dom-like1KH-domain-like of EngA bacterial GTPase enzymes, C-terminal404-48288.52.3e-25

GTP_EFTU2Elongation factor Tu GTP binding domain57-174, 304-39672.43.1e-20

AIG11AIG1 family57-15948.84.9e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_093455835.1 MULTISPECIES: ribosome biogenesis GTPase Der [unclassified S... 21000.0e+00
WP_003977066.1 MULTISPECIES: ribosome biogenesis GTPase Der [Streptomyces] ... 20990.0e+00
AIJ16692.2 GTPase Der [Streptomyces lividans TK24] >gb 20980.0e+00
WP_109033558.1 ribosome biogenesis GTPase Der [Streptomyces rubrogriseus] >... 20810.0e+00
WP_059299757.1 ribosome biogenesis GTPase Der [Streptomyces canus] 20780.0e+00
WP_164272773.1 ribosome biogenesis GTPase Der [Streptomyces rubrogriseus] >... 20770.0e+00
WP_159330251.1 ribosome biogenesis GTPase Der [Streptomyces tendae] 20760.0e+00
WP_210977482.1 ribosome biogenesis GTPase Der [Streptomyces sp. RM72] >lcl 20740.0e+00
WP_061445539.1 ribosome biogenesis GTPase Der [Streptomyces sp. CCM_MD2014]... 20730.0e+00
WP_030187531.1 MULTISPECIES: ribosome biogenesis GTPase Der [Streptomyces] ... 20690.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear