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IDSCO1880 TypeCDS
From6653315 nt length1335
To6654649 aa length444
Gene pI6.38
Definitionputative secreted pectate lyase M.W (Da)47731
NoteSCI39.27c AseI frg.I
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6375 putative secreted pectate lyase6048.0e-174
sgrSGR_216 putative secreted pectate lyase4494.0e-127
samSAM23877_1954 Pectate lyase8030.0e+00
scabSCAB70551 putative secreted pectate lyase5188.0e-148

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Pec_lyase_C1Pectate lyase156-363173.34.5e-51

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028028.1 MULTISPECIES: polysaccharide lyase family 1 protein [Strepto... 22790.0e+00
WP_003976940.1 MULTISPECIES: polysaccharide lyase family 1 protein [Strepto... 22750.0e+00
WP_106518519.1 polysaccharide lyase family 1 protein [Streptomyces sp. 111W... 22720.0e+00
WP_189284566.1 polysaccharide lyase family 1 protein [Streptomyces anthocya... 22700.0e+00
WP_191850957.1 polysaccharide lyase family 1 protein [Streptomyces anthocya... 22590.0e+00
WP_164277495.1 pectate lyase [Streptomyces rubrogriseus] >gb 22150.0e+00
WP_109032002.1 pectate lyase [Streptomyces rubrogriseus] 22110.0e+00
WP_127893764.1 pectate lyase [Streptomyces sp. S10(2018)] 21670.0e+00
WP_125632757.1 MULTISPECIES: polysaccharide lyase family 1 protein [unclass... 21640.0e+00
MYS56823.1 pectate lyase [Streptomyces sp. SID6013] 21620.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear