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IDSCO1882 TypeCDS
From6650956 nt length1359
To6652314 aa length452
Gene pI4.84
Definitionputative secreted sugar-binding protein M.W (Da)47860
NoteSCI39.29c AseI frg.I
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6373 putative secreted sugar-binding protein6024.0e-173
sgrSGR_215 putative secreted sugar-binding protein5717.0e-164
samSAM23877_1956 Secreted sugar-binding protein7750.0e+00
scabSCAB70531 putative secreted sugar-binding protein6820.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SBP_bac_11Bacterial extracellular solute-binding protein65-355152.32.6e-44

SBP_bac_81Bacterial extracellular solute-binding protein69-380141.44.6e-41

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AIJ16569.1 sugar-binding protein [Streptomyces lividans TK24] >gb 21700.0e+00
WP_016325939.1 MULTISPECIES: sugar ABC transporter substrate-binding protei... 21690.0e+00
WP_164277499.1 sugar ABC transporter substrate-binding protein [Streptomyce... 21490.0e+00
WP_174855077.1 sugar ABC transporter substrate-binding protein [Streptomyce... 21480.0e+00
MYS70830.1 extracellular solute-binding protein [Streptomyces sp. SID5926] 21400.0e+00
WP_197924234.1 sugar ABC transporter substrate-binding protein [Streptomyce... 21390.0e+00
WP_176155550.1 MULTISPECIES: sugar ABC transporter substrate-binding protei... 21350.0e+00
WP_212729855.1 extracellular solute-binding protein [Streptomyces sp. V17-9... 21330.0e+00
AZM78407.1 sugar ABC transporter substrate-binding protein [Streptomyces sp.... 21330.0e+00
MYS53199.1 extracellular solute-binding protein [Streptomyces sp. SID6013] 21310.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear