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IDSCO1926 TypeCDS
From6608376 nt length759
To6609134 aa length252
Gene pI6.6
Definitionputative DNA-binding protein M.W (Da)26817
NoteSCC22.08c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6324 putative ArsR-family transcriptional regulator3209.0e-89
sgrSGR_5594 putative ArsR-family transcriptional regulator4114.0e-116
samSAM23877_1997 DNA-binding protein4495.0e-163
scabSCAB70021 putative ArsR-family transcriptional regulator4015.0e-113
saceSACE_2173 probable transcriptional regulator1647.0e-42
nfarnfa35610 putative DNA-binding protein1423.0e-35

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_51Bacterial regulatory protein, arsR family18-6327.51.8e-06

HTH_241Winged helix-turn-helix DNA-binding27-6326.92.3e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976893.1 MULTISPECIES: transcriptional regulator [Streptomyces] >gb 10271.2e-139
WP_087809996.1 ArsR family transcriptional regulator [Streptomyces sp. CS11... 10261.8e-139
WP_121714660.1 transcriptional regulator [Streptomyces sp. E5N91] 10211.1e-138
WP_167307457.1 MULTISPECIES: transcriptional regulator [Streptomyces] 10211.4e-138
WP_202492436.1 MULTISPECIES: transcriptional regulator [Streptomyces] >gb 10202.0e-138
WP_109031966.1 transcriptional regulator [Streptomyces rubrogriseus] >gb 10182.8e-138
WP_203697362.1 transcriptional regulator [Streptomyces rubrogriseus] 10123.4e-137
WP_007448285.1 MULTISPECIES: transcriptional regulator [Streptomyces] >gb 10081.0e-136
WP_164419363.1 transcriptional regulator [Streptomyces coelicoflavus] 10071.2e-136
WP_054102436.1 transcriptional regulator [Streptomyces sp. OM5714] >lcl 10071.3e-136

PSORT result

LocalizationCertaintyPSORT said
Not Clear