-- | --

IDSCO1967 TypeCDS
From6559391 nt length879
To6560269 aa length292
Gene pI11.6
Definitionputative integral membrane protein M.W (Da)30943
NoteSC3C9.02c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6272 putative integral membrane protein3431.0e-95
sgrSGR_5557 putative integral membrane protein3002.0e-82
samSAM23877_2045 putative integral membrane protein4755.0e-172
scabSCAB69421 putative integral membrane protein3709.0e-104
nfarnfa37600 putative membrane protein1501.0e-37

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MHYT3Bacterial signalling protein N terminal repeat56-108, 120-171, 182-231120.12.9e-35

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028070.1 MULTISPECIES: membrane protein [Streptomyces] >gb 10221.2e-137
WP_136209002.1 hypothetical protein [Streptomyces sp. LRa12] >lcl 10202.8e-137
WP_003976852.1 MULTISPECIES: membrane protein [Streptomyces] >gb 10203.1e-137
WP_030866705.1 MULTISPECIES: membrane protein [Streptomyces] >lcl 10184.6e-137
WP_164275194.1 hypothetical protein [Streptomyces rubrogriseus] >gb 10031.1e-134
MYS74233.1 hypothetical protein [Streptomyces sp. SID5926] 9986.4e-134
WP_115741562.1 hypothetical protein [Streptomyces sp. CB09001] >gb 9977.0e-134
WP_109031927.1 hypothetical protein [Streptomyces rubrogriseus] 9961.1e-133
WP_076973826.1 hypothetical protein [Streptomyces sp. M1013] >gb 9621.8e-128
WP_164246136.1 hypothetical protein [Streptomyces coelicoflavus] >gb 9578.5e-128

PSORT result

LocalizationCertaintyPSORT said
Not Clear