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IDSCO1998 TypeCDS
From6532879 nt length1509
To6534387 aa length502
GenerpsA pI4.27
Definition30S ribosomal protein S1 M.W (Da)55034
NoteSC7H2.12c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6233 putative ribosomal protein S18220.0e+00
sgrSGR_5534 putative 30S ribosomal protein S18800.0e+00
samSAM23877_2081 30S ribosomal protein S19260.0e+00
scabSCAB69061 putative ribosomal protein S19070.0e+00
saceSACE_5431 30S ribosomal protein S17160.0e+00
nfarnfa18970 putative ribosomal protein S17120.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

S14S1 RNA binding domain36-108, 124-191, 209-280, 294-366261.13.3e-79

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976820.1 MULTISPECIES: 30S ribosomal protein S1 [Streptomyces] >gb 21320.0e+00
GGL42179.1 30S ribosomal protein S1 [Streptomyces anthocyanicus] >dbj 21290.0e+00
WP_030185916.1 30S ribosomal protein S1 [Streptomyces violaceorubidus] 21290.0e+00
WP_055571156.1 30S ribosomal protein S1 [Streptomyces prasinopilosus] >emb 21270.0e+00
WP_125495358.1 MULTISPECIES: 30S ribosomal protein S1 [unclassified Strepto... 21260.0e+00
WP_122615032.1 30S ribosomal protein S1 [Streptomyces sp. Tu 4128] 21250.0e+00
GGR93998.1 30S ribosomal protein S1 [Streptomyces parvulus] 21250.0e+00
WP_133888498.1 30S ribosomal protein S1 [Streptomyces sp. BK208] >lcl 21250.0e+00
WP_059299143.1 MULTISPECIES: 30S ribosomal protein S1 [Streptomyces] >lcl 21250.0e+00
WP_064727355.1 MULTISPECIES: 30S ribosomal protein S1 [Streptomyces] >gb 21250.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear