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IDSCO2000 TypeCDS
From6531625 nt length2997
To6528629 aa length998
Gene pI10.29
Definitionputative ATP-binding RNA helicase M.W (Da)105806
NoteSC7H2.14 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6231 putative ATP-dependent RNA helicase5635.0e-161
sgrSGR_5532 putative ATP-dependent RNA helicase6241.0e-179
samSAM23877_2083 ATP-dependent helicase HrpB11900.0e+00
scabSCAB69041 putative ATP-dependent RNA helicase6670.0e+00
saceSACE_3130 ATP-dependent helicase HrpB3691.0e-102

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HrpB_C1ATP-dependent helicase C-terminal851-983165.85.8e-49

Helicase_C1Helicase conserved C-terminal domain227-34242.85e-11

HA21Helicase associated domain (HA2)405-44826.08.3e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028086.1 ATP-binding RNA helicase [Streptomyces coelicolor] >gb 36010.0e+00
WP_202492971.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] 35640.0e+00
WP_106518446.1 ATP-dependent helicase [Streptomyces sp. 111WW2] >gb 35140.0e+00
WP_189283749.1 DEAD/DEAH box helicase [Streptomyces anthocyanicus] >dbj 34830.0e+00
WP_191849180.1 DEAD/DEAH box helicase [Streptomyces anthocyanicus] >dbj 32970.0e+00
WP_136209257.1 DEAD/DEAH box helicase [Streptomyces sp. LRa12] >lcl 32530.0e+00
WP_030866655.1 DEAD/DEAH box helicase [Streptomyces violaceoruber] 32450.0e+00
WP_115741590.1 DEAD/DEAH box helicase [Streptomyces sp. CB09001] >gb 29710.0e+00
WP_193486157.1 DEAD/DEAH box helicase [Streptomyces anthocyanicus] >dbj 19190.0e+00
WP_093455900.1 MULTISPECIES: DEAD/DEAH box helicase [unclassified Streptomy... 19070.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear