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IDSCO2008 TypeCDS
From6518244 nt length1257
To6516988 aa length418
Gene pI5.05
Definitionputative periplasmic branched chain amino acid binding protein M.W (Da)43471
NoteSC7H2.22 AseI frg.C
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6224 putative branched-chain amino acid ABC transporter substrate-binding protein4318.0e-122
sgrSGR_5523 putative branched chain amino acid ABC transporter substrate-binding protein4787.0e-136
samSAM23877_2092 Branched chain amino acid binding protein6170.0e+00
scabSCAB68931 putative branched-chain amino acid ABC transporter substrate-binding protein6270.0e+00
nfarnfa18710 putative transporter1195.0e-28

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_61Periplasmic binding protein49-406182.81.3e-53

ANF_receptor1Receptor family ligand binding region71-403102.91.7e-29

Peripla_BP_51Periplasmic binding protein domain185-40943.61.7e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AIJ16445.2 branched chain amino acid binding protein [Streptomyces lividans ... 17360.0e+00
MYS70451.1 ABC transporter substrate-binding protein [Streptomyces sp. SID59... 17340.0e+00
WP_202492974.1 MULTISPECIES: branched-chain amino acid ABC transporter subs... 17080.0e+00
WP_203696663.1 branched-chain amino acid ABC transporter substrate-binding ... 17070.0e+00
WP_003976809.1 MULTISPECIES: branched-chain amino acid ABC transporter subs... 17040.0e+00
AXL88085.1 branched chain amino acid ABC transporter substrate-binding prote... 17030.0e+00
WP_164276841.1 branched-chain amino acid ABC transporter substrate-binding ... 17020.0e+00
WP_193783163.1 branched-chain amino acid ABC transporter substrate-binding ... 16930.0e+00
OWA04262.1 branched chain amino acid ABC transporter substrate-binding prote... 16860.0e+00
MZG15511.1 ABC transporter substrate-binding protein [Streptomyces sp. SID59... 16790.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear