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IDSCO2037 TypeCDS
From6478202 nt length1284
To6479485 aa length427
GenetrpB pI4.88
Definitiontryptophan synthase beta subunit M.W (Da)45384
NoteSC4G6.06c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6177 putative tryptophan synthase beta subunit7690.0e+00
sgrSGR_5471 putative tryptophan synthase beta subunit7820.0e+00
samSAM23877_2124 tryptophan synthase%2C beta subunit8370.0e+00
scabSCAB68501 putative tryptophan synthase beta subunit8290.0e+00
saceSACE_5749 tryptophan synthase beta chain5862.0e-168
nfarnfa18610 putative tryptophan synthase beta subunit5501.0e-157

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PALP1Pyridoxal-phosphate dependent enzyme65-390176.19.1e-52

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976779.1 MULTISPECIES: tryptophan synthase subunit beta [Streptomyces... 21570.0e+00
WP_106517109.1 tryptophan synthase subunit beta [Streptomyces sp. 111WW2] >... 21540.0e+00
WP_093455909.1 MULTISPECIES: tryptophan synthase subunit beta [Streptomyces... 21490.0e+00
WP_115741621.1 tryptophan synthase subunit beta [Streptomyces sp. CB09001] ... 21440.0e+00
WP_109031866.1 tryptophan synthase subunit beta [Streptomyces rubrogriseus]... 21420.0e+00
WP_121712575.1 tryptophan synthase subunit beta [Streptomyces sp. E5N91] 21380.0e+00
WP_059299107.1 MULTISPECIES: tryptophan synthase subunit beta [Streptomyces... 21320.0e+00
WP_030186004.1 tryptophan synthase subunit beta [Streptomyces violaceorubid... 21300.0e+00
WP_121702848.1 tryptophan synthase subunit beta [Streptomyces sp. E5N298] 21280.0e+00
WP_164413400.1 tryptophan synthase subunit beta [Streptomyces coelicoflavus... 21250.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear