-- | --

IDSCO2060 TypeCDS
From6458695 nt length921
To6459615 aa length306
Gene pI10.55
Definitionputative integral membrane transport protein M.W (Da)31170
NoteSC4G6.29c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6147 putative ABC transporter permease protein3362.0e-93
sgrSGR_5444 putative ABC transporter permease protein3523.0e-98
samSAM23877_2147 putative integral membrane transport protein4312.0e-154
scabSCAB68291 putative ABC transporter permease protein4046.0e-114

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter81-26646.13.5e-12

ABC2_membrane_31ABC-2 family transporter protein116-29734.51.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAB51452.1 putative integral membrane transport protein [Streptomyces coeli... 9279.4e-123
GHA36508.1 transporter [Streptomyces anthocyanicus] 9261.3e-122
GHA98777.1 transporter [Streptomyces tendae] 9172.9e-121
QUW90768.1 hypothetical protein KE639_01960 [Streptomyces sp. V17-9] 8963.7e-118
WP_222514085.1 ABC transporter permease [Streptomyces sp. SS06011] 8921.3e-117
8889.8e-117
EHN73607.1 integral membrane transport protein [Streptomyces coelicoflavus Z... 8821.0e-115
GGR94506.1 transporter [Streptomyces parvulus] 8685.9e-114
WP_030866579.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 8666.2e-114
WP_003976755.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 8666.4e-114

PSORT result

LocalizationCertaintyPSORT said
Not Clear