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IDSCO2064 TypeCDS
From6452332 nt length3540
To6455871 aa length1179
Gene pI5.64
Definitionputative DNA polymerase III alpha chain M.W (Da)130766
NoteSC4G6.33c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6143 putative DNA polymerase III alpha subunit23100.0e+00
sgrSGR_5440 putative DNA polymerase III alpha subunit22020.0e+00
samSAM23877_2151 DNA polymerase III subunit alpha24220.0e+00
scabSCAB68251 putative DNA polymerase III alpha subunit22520.0e+00
saceSACE_5815 DNA polymerase III alpha subunit12330.0e+00
nfarnfa18000 putative DNA polymerase III alpha subunit14410.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol3_alpha1Bacterial DNA polymerase III alpha subunit316-756541.21.4e-162

PHP1PHP domain8-194147.44.2e-43

HHH_61Helix-hairpin-helix motif829-91783.01.3e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976751.1 MULTISPECIES: DNA polymerase III subunit alpha [Streptomyces... 62510.0e+00
WP_121709623.1 DNA polymerase III subunit alpha [Streptomyces sp. E5N91] 62480.0e+00
WP_193486185.1 DNA polymerase III subunit alpha [Streptomyces anthocyanicus... 62450.0e+00
WP_159326652.1 DNA polymerase III subunit alpha [Streptomyces tendae] 62300.0e+00
WP_109031844.1 DNA polymerase III subunit alpha [Streptomyces rubrogriseus]... 62280.0e+00
WP_076973891.1 DNA polymerase III subunit alpha [Streptomyces sp. M1013] >g... 62270.0e+00
WP_189748890.1 DNA polymerase III subunit alpha [Streptomyces tendae] >dbj 62230.0e+00
WP_030191923.1 DNA polymerase III subunit alpha [Streptomyces violaceorubid... 62220.0e+00
WP_087809864.1 DNA polymerase III subunit alpha [Streptomyces sp. CS113] >g... 62220.0e+00
WP_121703436.1 MULTISPECIES: DNA polymerase III subunit alpha [unclassified... 62190.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear