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IDSCO2073 TypeCDS
From6442353 nt length945
To6443297 aa length314
Gene pI6.57
Definitionputative ribosomal large subunit pseudouridine synthase M.W (Da)34056
NoteSC4A10.06c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6133 putative pseudouridylate synthase5637.0e-162
sgrSGR_5432 putative ribosomal large subunit pseudouridine synthase5662.0e-162
samSAM23877_2162 putative enzyme5820.0e+00
scabSCAB68131 putative pseudouridylate synthase5677.0e-163
saceSACE_5823 ribosomal large subunit pseudouridine synthase4245.0e-120
nfarnfa17870 putative RNA pseudouridine synthase4152.0e-117

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PseudoU_synth_21RNA pseudouridylate synthase93-247110.29.5e-32

S41S4 domain19-6227.02.5e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976742.1 MULTISPECIES: RluA family pseudouridine synthase [Streptomyc... 14510.0e+00
WP_136208521.1 MULTISPECIES: RluA family pseudouridine synthase [Streptomyc... 14500.0e+00
WP_202492444.1 MULTISPECIES: RluA family pseudouridine synthase [Streptomyc... 14480.0e+00
WP_121713989.1 MULTISPECIES: RluA family pseudouridine synthase [Streptomyc... 14470.0e+00
WP_109031837.1 RluA family pseudouridine synthase [Streptomyces rubrogriseu... 14450.0e+00
NEC31636.1 RluA family pseudouridine synthase [Streptomyces rubrogriseus] 14440.0e+00
WP_159326665.1 RluA family pseudouridine synthase [Streptomyces tendae] 14440.0e+00
WP_127894772.1 MULTISPECIES: RluA family pseudouridine synthase [unclassifi... 14430.0e+00
WP_203695095.1 RluA family pseudouridine synthase [Streptomyces rubrogriseu... 14410.0e+00
WP_189748902.1 RluA family pseudouridine synthase [Streptomyces tendae] >db... 14400.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear