-- | --

IDSCO2075 TypeCDS
From6440825 nt length720
To6441544 aa length239
Gene pI9.95
Definitionputative DNA-binding protein M.W (Da)25225
NoteSC4A10.08c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6131 putative DNA-binding protein1662.0e-42
sgrSGR_5430 putative DNA-binding protein2192.0e-58
samSAM23877_2166 DNA-binding protein3672.0e-130
scabSCAB68111 putative DNA-binding protein3018.0e-83

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

zf-dskA_traR1Prokaryotic dksA/traR C4-type zinc finger202-23747.79.6e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
6482.2e-82
WP_121713993.1 TraR/DksA C4-type zinc finger protein [Streptomyces sp. E5N9... 6502.7e-82
EFD69828.1 DNA-binding protein [Streptomyces lividans TK24] >gb 6455.8e-82
WP_136208530.1 TraR/DksA C4-type zinc finger protein [Streptomyces sp. LRa1... 6461.0e-81
WP_030866572.1 MULTISPECIES: TraR/DksA C4-type zinc finger protein [Strepto... 6411.5e-81
WP_134111859.1 MULTISPECIES: TraR/DksA C4-type zinc finger protein [Strepto... 6441.8e-81
WP_106960340.1 MULTISPECIES: TraR/DksA C4-type zinc finger protein [Strepto... 6414.8e-81
WP_191849193.1 TraR/DksA C4-type zinc finger protein [Streptomyces anthocya... 6414.8e-81
AIJ16377.2 DNA-binding protein [Streptomyces lividans TK24] >gb 6401.4e-80
GHA36390.1 DNA-binding protein [Streptomyces anthocyanicus] 6401.4e-80

PSORT result

LocalizationCertaintyPSORT said
Not Clear