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IDSCO2105 TypeCDS
From6404262 nt length366
To6404627 aa length121
Gene pI4.5
Definitionputative transcriptional regulatory protein (fragment). M.W (Da)13286
NoteSC4A10.38c SC2C1A.01c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6098 putative transcriptional regulatory protein2051.0e-54
sgrSGR_5397 conserved hypothetical protein2237.0e-60
samSAM23877_2198 hypothetical protein2342.0e-82
scabSCAB67771 putative transcriptional regulatory protein2329.0e-63
saceSACE_1711 transcriptional regulatory protein1143.0e-27

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_171Helix-turn-helix domain15-4832.56.5e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976711.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 5424.8e-70
WP_087809829.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 5364.2e-69
WP_031030902.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 5347.5e-69
WP_122614951.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 5312.5e-68
WP_153180272.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 5312.5e-68
WP_100044171.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 5312.9e-68
WP_030858998.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 5303.0e-68
WP_043373911.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 5303.2e-68
WP_224289491.1 helix-turn-helix domain-containing protein [Streptomyces oli... 5304.1e-68
WP_127896972.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 5294.9e-68

PSORT result

LocalizationCertaintyPSORT said
Not Clear