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IDSCO2164 TypeCDS
From6338056 nt length3126
To6341181 aa length1041
Gene pI4.49
Definitionputative integral membrane efflux protein M.W (Da)108054
NoteSt6G10A.02c SC5F7.37c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6040 putative cation/multidrug efflux protein13990.0e+00
sgrSGR_5345 putative integral membrane efflux protein15160.0e+00
samSAM23877_2259 Integral membrane efflux protein18150.0e+00
scabSCAB67221 putative cation/multidrug efflux protein16120.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ACR_tran1AcrB/AcrD/AcrF family5-1006710.72.5e-213

MMPL1MMPL family729-101739.04.1e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976652.1 MULTISPECIES: efflux RND transporter permease subunit [Strep... 41490.0e+00
WP_193486230.1 efflux RND transporter permease subunit [Streptomyces anthoc... 41460.0e+00
WP_210984806.1 efflux RND transporter permease subunit [Streptomyces sp. RK... 41430.0e+00
WP_189283775.1 efflux RND transporter permease subunit [Streptomyces anthoc... 41420.0e+00
WP_121716054.1 efflux RND transporter permease subunit [Streptomyces sp. E5... 41420.0e+00
WP_109031774.1 efflux RND transporter permease subunit [Streptomyces rubrog... 41090.0e+00
MYS73692.1 MMPL family transporter [Streptomyces sp. SID5926] 41060.0e+00
WP_164272103.1 efflux RND transporter permease subunit [Streptomyces rubrog... 40970.0e+00
WP_108987008.1 efflux RND transporter permease subunit [Streptomyces coelic... 40440.0e+00
WP_164141645.1 efflux RND transporter permease subunit [Streptomyces coelic... 40400.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear