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IDSCO2258 TypeCDS
From6242121 nt length825
To6241297 aa length274
Gene pI9.46
Definitionprobable ABC-transporter transmembrane component. M.W (Da)29550
NoteSCC75A.04 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5940 putative ABC transporter permease protein3561.0e-99
sgrSGR_5251 putative ABC transporter permease protein3362.0e-93
samSAM23877_2337 ABC transporter transmembrane protein4471.0e-161
scabSCAB66361 putative ABC transporter permease protein4314.0e-122
saceSACE_4276 ABC transporter, permease component2022.0e-53

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter27-239117.93.5e-34

ABC2_membrane_31ABC-2 family transporter protein74-26655.15.7e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976554.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 12514.5e-173
WP_087809700.1 ABC transporter permease [Streptomyces sp. CS113] >gb 12481.1e-172
WP_226024500.1 ABC transporter permease [Streptomyces hyderabadensis] 12054.6e-166
WP_104630894.1 ABC transporter permease [Streptomyces sp. MH60] >gb 11621.8e-159
WP_133888286.1 ABC transporter permease [Streptomyces sp. BK208] >lcl 11587.2e-159
WP_190188267.1 ABC transporter permease [Streptomyces minutiscleroticus] >d... 11371.2e-155
WP_189321094.1 ABC transporter permease [Streptomyces flaveus] >dbj 11361.4e-155
GHE82523.1 transport permease protein [Streptomyces fumanus] 11362.7e-155
WP_190202711.1 ABC transporter permease [Streptomyces fumanus] 11343.1e-155
WP_188179487.1 ABC transporter permease [Streptomyces sp. TRM S81-3] >lcl 11282.0e-154

PSORT result

LocalizationCertaintyPSORT said
Not Clear