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IDSCO2463 TypeCDS
From6018138 nt length1734
To6016405 aa length577
Gene pI6.26
Definitionputative ABC transporter M.W (Da)62767
NoteSC7A8.02 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5681 putative ABC transporter ATP-binding protein9580.0e+00
sgrSGR_5069 putative ABC transporter ATPase and permease component9800.0e+00
samSAM23877_2516 conserved membrane protein of unknown function10880.0e+00
scabSCAB62521 putative ABC transporter ATP-binding protein10330.0e+00
nfarnfa2630 putative ABC transporter6400.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_membrane1ABC transporter transmembrane region19-288154.44.2e-45

ABC_tran1ABC transporter352-49889.23.1e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976341.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 27350.0e+00
GGL25585.1 multidrug ABC transporter ATP-binding protein [Streptomyces anth... 27320.0e+00
WP_109033043.1 ABC transporter ATP-binding protein/permease [Streptomyces r... 27260.0e+00
MYS69095.1 ATP-binding cassette domain-containing protein [Streptomyces sp. ... 27200.0e+00
WP_121712146.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 27170.0e+00
WP_202493057.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 27130.0e+00
WP_087809488.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 27040.0e+00
WP_127894682.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 27030.0e+00
WP_203696354.1 ABC transporter ATP-binding protein/permease [Streptomyces r... 27020.0e+00
WP_104634867.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 26980.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear