-- | --

IDSCO2472 TypeCDS
From6005690 nt length687
To6005004 aa length228
Gene pI9.39
Definitionputative integral membrane protein M.W (Da)24953
NoteSC7A8.11 AseI frg.C
SignalP v.4.0Signal peptide | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5672 putative integral membrane protein3492.0e-97
sgrSGR_5062 putative integral membrane protein3201.0e-88
samSAM23877_2525 Integral membrane protein3752.0e-134
scabSCAB62441 putative integral membrane protein3483.0e-97
saceSACE_6721 integral membrane protein1072.0e-24

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF2181DUF218 domain58-17694.16e-27

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EOY47523.1 SanA protein [Streptomyces lividans 1326] >gb 10461.3e-143
WP_003976332.1 MULTISPECIES: YdcF family protein [Streptomyces] >gb 10452.8e-143
WP_093456108.1 MULTISPECIES: YdcF family protein [Streptomyces] >gb 10401.9e-142
WP_127896475.1 YdcF family protein [Streptomyces sp. S10(2018)] 10375.8e-142
WP_109033036.1 YdcF family protein [Streptomyces rubrogriseus] 10341.6e-141
WP_161377802.1 MULTISPECIES: YdcF family protein [Streptomyces] >lcl 10332.0e-141
MYS76532.1 hypothetical protein [Streptomyces sp. SID5926] 10299.5e-141
WP_226030766.1 YdcF family protein [Streptomyces hyderabadensis] 10238.6e-140
WP_164279091.1 YdcF family protein [Streptomyces rubrogriseus] >gb 10229.6e-140
WP_087809480.1 YdcF family protein [Streptomyces sp. CS113] >gb 10099.1e-138

PSORT result

LocalizationCertaintyPSORT said
Not Clear