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IDSCO2501 TypeCDS
From5967933 nt length897
To5968829 aa length298
Gene pI8.51
Definitionputative DNA-binding protein M.W (Da)34074
NoteSCC121.04c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5647 putative DNA-binding protein3801.0e-106
scabSCAB62071 putative DNA-binding protein3885.0e-109

*avm, Streptomyces avermitilis; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain23-10253.42.1e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AIJ15951.2 DNA-binding protein [Streptomyces lividans TK24] >gb 14690.0e+00
WP_003976301.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 14670.0e+00
WP_121714361.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14070.0e+00
WP_205350979.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13550.0e+00
AXL93206.1 DNA-binding protein [Streptomyces sp. CB09001] 13550.0e+00
WP_102927441.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13540.0e+00
WP_125635795.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 13500.0e+00
WP_061447113.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13490.0e+00
WP_186777396.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13470.0e+00
WP_164274780.1 helix-turn-helix domain-containing protein [Streptomyces rub... 13440.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear