-- | --

IDSCO2568 TypeCDS
From5893999 nt length1068
To5895066 aa length355
Gene pI11.15
Definitionputative DNA-binding protein M.W (Da)36853
NoteSCC123.06c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5491 putative exogenous DNA-binding protein2963.0e-81
sgrSGR_4976 putative DNA-binding protein2041.0e-53
samSAM23877_2615 putative DNA-binding protein3693.0e-128
scabSCAB60391 putative exogenous DNA-binding protein3155.0e-87
saceSACE_1435 competence protein ComEA helix-hairpin-helix region1133.0e-26

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HHH_31Helix-hairpin-helix motif294-35471.35.4e-20

HHH1Helix-hairpin-helix motif296-32238.74.6e-10

SLBB1SLBB domain213-26531.98.2e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_210983771.1 helix-hairpin-helix domain-containing protein [Streptomyces ... 10714.0e-143
WP_011028432.1 MULTISPECIES: ComEA family DNA-binding protein [Streptomyces... 10653.2e-142
NSL80906.1 ComEA family DNA-binding protein [Streptomyces coelicolor] >gb 10663.5e-142
WP_136209284.1 ComEA family DNA-binding protein [Streptomyces sp. LRa12] >l... 10533.1e-140
WP_030863684.1 MULTISPECIES: ComEA family DNA-binding protein [Streptomyces... 10523.3e-140
WP_079021217.1 MULTISPECIES: ComEA family DNA-binding protein [Streptomyces... 9844.1e-130
EFD69323.1 DNA-binding protein [Streptomyces lividans TK24] >gb 9838.9e-130
WP_191849433.1 ComEA family DNA-binding protein [Streptomyces anthocyanicus... 9792.6e-129
WP_093456135.1 MULTISPECIES: ComEA family DNA-binding protein [unclassified... 9767.5e-129
WP_109032961.1 ComEA family DNA-binding protein [Streptomyces rubrogriseus] 9281.7e-121

PSORT result

LocalizationCertaintyPSORT said
Not Clear